CDS

Accession Number TCMCG017C12090
gbkey CDS
Protein Id OMO98416.1
Location complement(join(7154..7171,7257..7358,7546..7761,7848..8026,8155..8221,8400..8458,8544..8598,8710..8779,8854..8943,9033..9109,9221..9252,9654..9747,9827..9914,9999..10219,10294..10367,10457..10739,10822..10956,11361..11582,11666..11845,11987..12084,12212..12318,12475..12581,12659..12790,13034..13243))
GeneID InterPro:IPR000330
Organism Corchorus olitorius
locus_tag COLO4_13917

Protein

Length 971aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01015337.1
Definition SNF2-related protein [Corchorus olitorius]
Locus_tag COLO4_13917

EGGNOG-MAPPER Annotation

COG_category K
Description chromatin-remodeling complex ATPase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K11654        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006323        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006333        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009553        [VIEW IN EMBL-EBI]
GO:0009561        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016584        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0031497        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0034728        [VIEW IN EMBL-EBI]
GO:0040034        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048229        [VIEW IN EMBL-EBI]
GO:0048506        [VIEW IN EMBL-EBI]
GO:0048509        [VIEW IN EMBL-EBI]
GO:0048510        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048584        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071103        [VIEW IN EMBL-EBI]
GO:0071824        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0080135        [VIEW IN EMBL-EBI]
GO:1900034        [VIEW IN EMBL-EBI]
GO:1900036        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGAAATCGTCCAAGGCTCCGGTGTCGTCCGATGATGCGCTATCCAACGGCTCCAATTCATCAGAAGAGGAGCGAATTAACGACCAGATCAACGGCGAGGAAGAAGAAGAAGACGAGGAAGAGCTCGAAGCCGTTGCTCGTTCTACCGCCGCCTCAGAGGAAGACGATGACGCTGCCCCTGATGAGAACGGCGACGACGCTGACGAGGACGATTCTACTGGGGCTGACCCAGAAATTAGCAAGCGAGAAAAGGAAAGGCTAAAAGAAATGCAGAAACTAAAGAAGCAGAAGATTCAGGAAATACTGGATACTCAAAATGCTGCCATTGATGCTGATATGAATAATAGGGGAAAGGGACGATTAAAGTACCTTTTGCAACAAACGGAGTTATTTGCTCATTTTGCCAAAGGTGACCCTTCATCATCACAAAAGAAGGTGAAAGGAAGGGGCCGCCATGCATCAAAAGTAACTGAAGAGGAAGAAGATGAAGAGTGTCTCAAGGAGGAAGAGGATGGTTTGGCTGGAAACACCCGATTGCTGACTCAGCCTTCTTGTATTCAGGGAAAGATGAGGGACTACCAACTTGCTGGTTTAAACTGGCTTATACGACTGTATGAGAATGGTATAAATGGAATTCTTGCAGATGAAATGGGACTGGGTAAAACTTTGCAAACTATATCCTTAATGGGCTATCTGCATGAGTACCGAGGGATTACTGGCCCTCATATGGTTGTTGCTCCAAAATCAACTCTTGGTAATTGGATGAATGAAATACGTCGATTTTGTCCAGTCTTGCGAGCTGTAAAGTTTCTTGGGAATCCTGAAGAAAGAAGATACATCCGCGAGGAGTTACTTGTTGCTGGGAAGTTTGATGTCTGTGTCACAAGTTTTGAGATGGCTATCAAGGAGAAGTCTGCACTGCGTCGTTTTAGTTGGCGCTATATAATTATTGATGAAGCCCATCGAATTAAGAATGAGAATTCCCTCCTTTCAAAAACTATGAGGATCTACAATACTAATTACCGTCTTCTTATTACCGGTACTCCACTTCAGAATAATCTCCATGAGCTATGGTCTCTTCTTAACTTTTTGCTGCCAGAGATTTTTAGTTCTGCCGAAACTTTTGATGAGTGGTTTCAGATTTCTGGTGAAAATGACCAGCAGGAAGTTGTTCAACAACTTCACAAGGTTCTTCGGCCATTTCTCCTTCGGAGATTGAAATCAGATGTTGAGAAAGGTTTGCCTCCCAAAAAGGAAACTATCCTGAAAGTAGGAATGTCCCAGATGCAGAAACAGTATTATAGAGCTTTGCTGCAAAAAGATCTTGAGGTTGTTAATGCCGGTGGAGAGCGTAAGCGTCTTCTAAACATTGCAATGCAGCTGCGTAAATGCTGTAATCACCCATATCTTTTCCAAGGTGCTGAACCTGGACCTCCGTATACTGCAGGAGATCATCTTATAACCAATGCTGGAAAAATGGTTCTCTTGGACAAGTTACTTCCAAAGCTGAAGGAGCGTGATTCAAGAGTTCTGATATTTTCACAGATGACAAGGCTGCTGGATATTCTTGAAGATTATTTGATGTTTCGTGGGTACCTATATTGCCGTATTGATGGTAATACAGGTGGAGAAGATCGTGATGCTTCCATTGAAGCCTTCAACAAGCCAGGAAGTGAAAAATTTGTTTTCTTATTATCAACTAGGGCTGGAGGCCTTGGTATAAATCTTGCTACTGCAGATGTTGTCATTCTTTATGATAGTGACTGGAACCCACAAGTTGATCTTCAAGCACAGGATCGTGCTCACAGGATTGGTCAAAAGAAGGAAGTTCAAGTGTTCCGCTTTTGCACTGAGTACACTATTGAGGAAAAGGTGATTGAAAGGGCTTATAAAAAGCTTGCGTTAGATGCTCTGGTTATTCAACAAGGGCGACTTGCAGAGCAGAAAACTGCTGAACTGTATGATTTTGATGATGACAAGGATGAGAACAAGTTTGACTTCAAGAAAATTGTAAGCGAAAACTGGATTGAACCACCAAAGAGAGAGCGGAAGCGGAATTACTCGGAATCTGAGTACTTTAAACAAACCATGCGCCAAGGTGGTCCTGCAAAACCGAAGGAGCCTCGGATTCCTCGCATGCCTCAACTGCATGATTTCCAGTTTTTCAACACTCAGAGGCTGAGTGAGTTGTATGAGAAAGAAGTACGCTATCTCATGCAAGCACATCAGAAGAATCAGGTAAAGGATGCAATTGAAGTGGATGAACCTGAAGAAGGGGGAGATCCATTAACTGCTGAAGAGTTGGAAGAAAAGGAGCGACTATTGGAAGAGGGAAAAACTGAGGAGGAAGTTGAAAGATATGCAAAAGTTTTTAAAGAACGATATAAAGAGTTGAATGATTATGATAGGATCATTAAGAACATTGAAAGAGGAGAAGCCAGAATTTCTAGAAAAGATGAGATCATGAAAGCAATTGGCAAGAAATTGGATCGGTACAAGAATCCTTGGCTGGAAATGAAGATCCAGTATGGTCAAAACAAAGGGAAGCTGTACAATGAAGAATGTGATCGGTTCATGATATGCATGGTCCACAAGCTTGGTTATGGGAACTGGGAGGAGTTGAAGGCAGCATTCCGTACATCACCCTTGTTTCGATTTGACTGGTTTGTGAAGTCACGAACAACTCAAGAGCTGGCAAGGAGATGCGATACCCTCATTCGATTGGTTGAGAAGGAAAACCAAGAATATGATGAAAGGGAACGACAAGCCCGTAAAGAGAAGAAACTCGCTAAGAATATGACACCATCAAAGCGTGGTGGGAGGCAGCCAACTGAGAGTCCTAATCAATTAAAGAAACGAAAGCAGCTATCCATGGATGATTATGTGACGACCTCGGGAAAAAAGAGGAAGTGA
Protein:  
MAKSSKAPVSSDDALSNGSNSSEEERINDQINGEEEEEDEEELEAVARSTAASEEDDDAAPDENGDDADEDDSTGADPEISKREKERLKEMQKLKKQKIQEILDTQNAAIDADMNNRGKGRLKYLLQQTELFAHFAKGDPSSSQKKVKGRGRHASKVTEEEEDEECLKEEEDGLAGNTRLLTQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLMGYLHEYRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRYIREELLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYRALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTAGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYLYCRIDGNTGGEDRDASIEAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTAELYDFDDDKDENKFDFKKIVSENWIEPPKRERKRNYSESEYFKQTMRQGGPAKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQAHQKNQVKDAIEVDEPEEGGDPLTAEELEEKERLLEEGKTEEEVERYAKVFKERYKELNDYDRIIKNIERGEARISRKDEIMKAIGKKLDRYKNPWLEMKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWEELKAAFRTSPLFRFDWFVKSRTTQELARRCDTLIRLVEKENQEYDERERQARKEKKLAKNMTPSKRGGRQPTESPNQLKKRKQLSMDDYVTTSGKKRK